BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007E10SP1|AL425717
(821 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1678 1612 0.0
>3x_Contig1678
Length = 12472
Score = 1612 bits (811), Expect = 0.0
Identities = 818/821 (99%)
Strand = Plus / Minus
Query: 1 attttgattcaaagaagagatcaacggctatgccttcttctccaactgcaatgttccagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3509 attttgattcaaagaagagatcaacggctatgccttcttctccaactgcaatgttccagt 3450
Query: 61 atcaaatcgatgaaccaagcacagaaagtgaacatgatttttccaatgccagacaaaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3449 atcaaatcgatgaaccaagcacagaaagtgaacatgatttttccaatgccagacaaaagc 3390
Query: 121 ttgatcaggattctaccccagcaactcaatacggcttcagtgatgacaaacgtttagagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3389 ttgatcaggattctaccccagcaactcaatacggcttcagtgatgacaaacgtttagagt 3330
Query: 181 attcaatgaaatagcttcacattaacgaattatgttatattaacttgtgagaatgacata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3329 attcaatgaaatagcttcacattaacgaattatgttatattaacttgtgagaatgacata 3270
Query: 241 ttctagaatcatttactgtacattcacgcatttattccatatcttatctaattacatatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3269 ttctagaatcatttactgtacattcacgcatttattccatatcttatctaattacatatt 3210
Query: 301 ataattttwactctgcattcccaaatagaaaaaacacatctaaatagtagccacaacaga 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3209 ataattttaactctgcattcccaaatagaaaaaacacatctaaatagtagccacaacaga 3150
Query: 361 acacaatgttccacacctcaaatccgtgtttaaaagaacgattatctttcatgtgtcaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3149 acacaatgttccacacctcaaatccgtgtttaaaagaacgattatctttcatgtgtcaac 3090
Query: 421 gcaatgttacttgacagcacgttcatttttttctcggcattatttttggggctagacacg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3089 gcaatgttacttgacagcacgttcatttttttctcggcattatttttggggctagacacg 3030
Query: 481 atcgagaatctcgaaaaaaaaataaaacgtaacgtagccaaatggaaatagacaaaaata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3029 atcgagaatctcgaaaaaaaaataaaacgtaacgtagccaaatggaaatagacaaaaata 2970
Query: 541 cgtgaatctgttaaggtaccacaacatgacatcctcattagcaatcccttcagggcttat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2969 cgtgaatctgttaaggtaccacaacatgacatcctcattagcaatcccttcagggcttat 2910
Query: 601 tcagttaacaaagggcatcaattgatggaagtkagtkaaatgccttttgatgctgatctg 660
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 2909 tcagttaacaaagggcatcaattgatggaagtaagtaaaatgccttttgatgctgatctg 2850
Query: 661 aaggtgcttctagcgagttgcttggtagggttggtactgagcttatacctagttgtactc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2849 aaggtgcttctagcgagttgcttggtagggttggtactgagcttatacctagttgtactc 2790
Query: 721 ttattgtcaaataatccacgaaaggcctttgcgaatgagttgcaatacaggtctataaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2789 ttattgtcaaataatccacgaaaggcctttgcgaatgagttgcaatacaggtctataaaa 2730
Query: 781 gatggatcagtggttcatgagcctttgccgaacattgatga 821
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 2729 gatggatcagtggttcatgagcctttgccgaacattgatga 2689
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6720
Number of Sequences: 1807
Number of extensions: 6720
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 821
length of database: 10,358,551
effective HSP length: 16
effective length of query: 805
effective length of database: 10,329,639
effective search space: 8315359395
effective search space used: 8315359395
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)